STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLEC12BC-type lectin domain family 12 member B. (276 aa)    
Predicted Functional Partners:
SRFBP1
Serum response factor-binding protein 1.
      
 0.795
ASB17
Ankyrin repeat and SOCS box protein 17.
      
 0.790
CPSF6
Cleavage and polyadenylation specificity factor subunit 6 isoform X1.
      
 0.661
APOH
Beta-2-glycoprotein 1.
      
 0.536
SNX5
Sorting nexin; Involved in several stages of intracellular trafficking.
     
 0.530
LOC110580895
C-type lectin domain family 4 member D-like isoform X1.
   
  
 0.507
CD164L2
CD164 sialomucin-like 2 protein.
      
 0.489
STAP1
LOW QUALITY PROTEIN: signal-transducing adaptor protein 1.
      
 0.473
DDB1
DNA damage-binding protein 1.
      
 0.472
CLEC12A
C-type lectin domain family 12 member A.
   
  
0.462
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.