STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110581213Zinc finger protein 354A isoform X1. (647 aa)    
Predicted Functional Partners:
USP50
Inactive ubiquitin carboxyl-terminal hydrolase 50; Belongs to the peptidase C19 family.
      
 0.615
AK9
Adenylate kinase 9.
    
 0.608
ZNF608
Zinc finger protein 608.
      
 0.497
LOC110577427
Keratin, type II cuticular Hb5; Belongs to the intermediate filament family.
      
 0.480
LIN54
Protein lin-54 homolog.
    
 
 0.480
TUSC1
Tumor suppressor candidate gene 1 protein.
      
 0.452
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.