STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPM2ALaforin. (331 aa)    
Predicted Functional Partners:
NHLRC1
E3 ubiquitin-protein ligase NHLRC1.
    
 0.876
PPP1R3C
Protein phosphatase 1 regulatory subunit 3C; Acts as a glycogen-targeting subunit for PP1 and regulates its activity. Activates glycogen synthase, reduces glycogen phosphorylase activity and limits glycogen breakdown.
    
 0.685
FBXO30
F-box only protein 30.
 
    
 0.604
PPP1R3D
Protein phosphatase 1 regulatory subunit.
    
 0.576
AGL
LOW QUALITY PROTEIN: glycogen debranching enzyme.
      
 0.538
STBD1
Starch-binding domain-containing protein 1.
    
 
 0.531
GYS1
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
    
 0.521
GYG1
Glycogenin-1.
     
 0.519
DUSP9
Dual specificity protein phosphatase 9.
   
 
 0.514
CDC14A
Dual specificity protein phosphatase CDC14A.
     
 0.509
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.