STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF280DZinc finger protein 280D isoform X1. (979 aa)    
Predicted Functional Partners:
WDR70
WD repeat-containing protein 70.
      
 0.790
RNF216
E3 ubiquitin-protein ligase RNF216 isoform X1.
    
 
 0.733
SART1
U4/U6.U5 tri-snRNP-associated protein 1 isoform X1.
      
 0.724
SMC5
Structural maintenance of chromosomes protein 5.
   
   0.622
CUNH4orf22
LOW QUALITY PROTEIN: uncharacterized protein C4orf22 homolog.
      
 0.612
NIPBL
Nipped-B protein.
   
  
 0.610
ZMYM3
Zinc finger MYM-type protein 3.
   
 0.597
LOC110577789
Zinc finger MYM-type protein 3-like.
   
 0.597
HNRNPM
Heterogeneous nuclear ribonucleoprotein M isoform X1.
   
 
 0.556
AK9
Adenylate kinase 9.
    
  0.554
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.