STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLCED-glucuronyl C5-epimerase. (617 aa)    
Predicted Functional Partners:
NDST2
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 isoform X1.
   
 0.929
LOC110575484
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3 isoform X1.
   
 0.920
LOC110575489
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4.
   
 0.876
NDST1
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1.
   
 0.867
HS6ST1
Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.
    
 
 0.818
EXT1
Exostosin-1; Belongs to the glycosyltransferase 47 family.
      
 0.787
SLC35B3
Adenosine 3'-phospho 5'-phosphosulfate transporter 2 isoform X1.
      
 0.752
B3GAT3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
      
 0.748
B4GALT7
Beta-1,4-galactosyltransferase 7.
      
 0.725
EMC6
ER membrane protein complex subunit 6.
      
 0.716
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.