KIF12 protein (Neomonachus schauinslandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KIF12

Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (656 aa)

Predicted Functional Partners:

PLG

0.953

KIFAP3

0.837

PAH

0.734

CCHCR1

0.678

LUC7L

0.667

ZFYVE19

0.613

ZW10

0.587

ARF5

0.568

RAB19

0.546

RAB43

0.546

Your Current Organism:

Neomonachus schauinslandi

NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARF5	KIF12	A0A2Y9HTM9	A0A2Y9HD38	ADP-ribosylation factor 5; Belongs to the small GTPase superfamily. Arf family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.568
CCHCR1	KIF12	A0A2Y9HLG8	A0A2Y9HD38	Coiled-coil alpha-helical rod protein 1 isoform X1.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.678
CCHCR1	LUC7L	A0A2Y9HLG8	A0A2Y9HQ22	Coiled-coil alpha-helical rod protein 1 isoform X1.	Putative RNA-binding protein Luc7-like 1 isoform X4.	0.684
KIF12	ARF5	A0A2Y9HD38	A0A2Y9HTM9	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	ADP-ribosylation factor 5; Belongs to the small GTPase superfamily. Arf family.	0.568
KIF12	CCHCR1	A0A2Y9HD38	A0A2Y9HLG8	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Coiled-coil alpha-helical rod protein 1 isoform X1.	0.678
KIF12	KIFAP3	A0A2Y9HD38	A0A2Y9GK08	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-associated protein 3.	0.837
KIF12	LUC7L	A0A2Y9HD38	A0A2Y9HQ22	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Putative RNA-binding protein Luc7-like 1 isoform X4.	0.667
KIF12	PAH	A0A2Y9HD38	A0A2Y9GVI7	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Phenylalanine-4-hydroxylase.	0.734
KIF12	PLG	A0A2Y9HD38	A0A2Y9HH66	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Plasminogen; Plasmin dissolves the fibrin of blood clots and acts as a proteolytic factor in a variety of other processes including embryonic development, tissue remodeling, tumor invasion, and inflammation. In ovulation, weakens the walls of the Graafian follicle. It activates the urokinase-type plasminogen activator, collagenases and several complement zymogens, such as C1 and C5. Cleavage of fibronectin and laminin leads to cell detachment and apoptosis. Also cleaves fibrin, thrombospondin and von Willebrand factor. Its role in tissue remodeling and tumor invasion may be modulated b [...]	0.953
KIF12	RAB19	A0A2Y9HD38	A0A2Y9HAH3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Ras-related protein Rab-19.	0.546
KIF12	RAB43	A0A2Y9HD38	A0A2Y9HGM6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Ras-related protein Rab-43 isoform X1.	0.546
KIF12	ZFYVE19	A0A2Y9HD38	A0A2Y9HHD6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	abscission/NoCut checkpoint regulator.	0.613
KIF12	ZW10	A0A2Y9HD38	A0A2Y9HJH3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Centromere/kinetochore protein zw10 homolog.	0.587
KIFAP3	KIF12	A0A2Y9GK08	A0A2Y9HD38	Kinesin-associated protein 3.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.837
LUC7L	CCHCR1	A0A2Y9HQ22	A0A2Y9HLG8	Putative RNA-binding protein Luc7-like 1 isoform X4.	Coiled-coil alpha-helical rod protein 1 isoform X1.	0.684
LUC7L	KIF12	A0A2Y9HQ22	A0A2Y9HD38	Putative RNA-binding protein Luc7-like 1 isoform X4.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.667
PAH	KIF12	A0A2Y9GVI7	A0A2Y9HD38	Phenylalanine-4-hydroxylase.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.734
PAH	PLG	A0A2Y9GVI7	A0A2Y9HH66	Phenylalanine-4-hydroxylase.	Plasminogen; Plasmin dissolves the fibrin of blood clots and acts as a proteolytic factor in a variety of other processes including embryonic development, tissue remodeling, tumor invasion, and inflammation. In ovulation, weakens the walls of the Graafian follicle. It activates the urokinase-type plasminogen activator, collagenases and several complement zymogens, such as C1 and C5. Cleavage of fibronectin and laminin leads to cell detachment and apoptosis. Also cleaves fibrin, thrombospondin and von Willebrand factor. Its role in tissue remodeling and tumor invasion may be modulated b [...]	0.458
PLG	KIF12	A0A2Y9HH66	A0A2Y9HD38	Plasminogen; Plasmin dissolves the fibrin of blood clots and acts as a proteolytic factor in a variety of other processes including embryonic development, tissue remodeling, tumor invasion, and inflammation. In ovulation, weakens the walls of the Graafian follicle. It activates the urokinase-type plasminogen activator, collagenases and several complement zymogens, such as C1 and C5. Cleavage of fibronectin and laminin leads to cell detachment and apoptosis. Also cleaves fibrin, thrombospondin and von Willebrand factor. Its role in tissue remodeling and tumor invasion may be modulated b [...]	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.953
PLG	PAH	A0A2Y9HH66	A0A2Y9GVI7	Plasminogen; Plasmin dissolves the fibrin of blood clots and acts as a proteolytic factor in a variety of other processes including embryonic development, tissue remodeling, tumor invasion, and inflammation. In ovulation, weakens the walls of the Graafian follicle. It activates the urokinase-type plasminogen activator, collagenases and several complement zymogens, such as C1 and C5. Cleavage of fibronectin and laminin leads to cell detachment and apoptosis. Also cleaves fibrin, thrombospondin and von Willebrand factor. Its role in tissue remodeling and tumor invasion may be modulated b [...]	Phenylalanine-4-hydroxylase.	0.458