STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFAP1L1Actin filament-associated protein 1-like 1. (884 aa)    
Predicted Functional Partners:
LOC110592947
Vacuolar protein sorting-associated protein 53 homolog.
      
 0.772
SYT10
Synaptotagmin-10.
      
 0.771
TDRD5
Tudor domain-containing protein 5 isoform X1.
      
 0.749
RPH3AL
Rab effector Noc2.
      
 0.730
SLFN5
Schlafen family member 5.
      
 0.682
GEMIN4
Gem-associated protein 4.
      
 0.627
PCYOX1L
Prenylcysteine oxidase-like.
      
 0.626
CNTN6
LOW QUALITY PROTEIN: contactin-6.
      
 0.604
CLINT1
Clathrin interactor 1 isoform X1.
      
 0.537
ABLIM3
Actin-binding LIM protein 3 isoform X3.
   
  
 0.512
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.