Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATR | CHEK2 | A0A2Y9G8A5 | A0A2Y9I5M3 | Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. | Serine/threonine-protein kinase Chk2. | 0.993 |
ATR | RFX3 | A0A2Y9G8A5 | A0A2Y9HKS6 | Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. | Transcription factor RFX3. | 0.769 |
BCO2 | NAALADL2 | A0A2Y9HRC2 | A0A2Y9I2R0 | LOW QUALITY PROTEIN: beta,beta-carotene 9',10'-oxygenase. | Inactive N-acetylated-alpha-linked acidic dipeptidase-like protein 2. | 0.571 |
BCO2 | RFX3 | A0A2Y9HRC2 | A0A2Y9HKS6 | LOW QUALITY PROTEIN: beta,beta-carotene 9',10'-oxygenase. | Transcription factor RFX3. | 0.505 |
BCO2 | TMEM117 | A0A2Y9HRC2 | A0A2Y9IGB0 | LOW QUALITY PROTEIN: beta,beta-carotene 9',10'-oxygenase. | Transmembrane protein 117. | 0.527 |
CDKAL1 | RFX3 | A0A2Y9HLL1 | A0A2Y9HKS6 | Threonylcarbamoyladenosine tRNA methylthiotransferase. | Transcription factor RFX3. | 0.517 |
CHEK2 | ATR | A0A2Y9I5M3 | A0A2Y9G8A5 | Serine/threonine-protein kinase Chk2. | Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. | 0.993 |
CHEK2 | RFX3 | A0A2Y9I5M3 | A0A2Y9HKS6 | Serine/threonine-protein kinase Chk2. | Transcription factor RFX3. | 0.677 |
FOXJ1 | RFX3 | A0A2Y9GC08 | A0A2Y9HKS6 | Forkhead box protein J1. | Transcription factor RFX3. | 0.734 |
INSM1 | RFX3 | A0A2Y9HXI7 | A0A2Y9HKS6 | Insulinoma-associated protein 1. | Transcription factor RFX3. | 0.495 |
NAALADL2 | BCO2 | A0A2Y9I2R0 | A0A2Y9HRC2 | Inactive N-acetylated-alpha-linked acidic dipeptidase-like protein 2. | LOW QUALITY PROTEIN: beta,beta-carotene 9',10'-oxygenase. | 0.571 |
NAALADL2 | RFX3 | A0A2Y9I2R0 | A0A2Y9HKS6 | Inactive N-acetylated-alpha-linked acidic dipeptidase-like protein 2. | Transcription factor RFX3. | 0.497 |
NAALADL2 | TMEM117 | A0A2Y9I2R0 | A0A2Y9IGB0 | Inactive N-acetylated-alpha-linked acidic dipeptidase-like protein 2. | Transmembrane protein 117. | 0.748 |
RFX3 | ATR | A0A2Y9HKS6 | A0A2Y9G8A5 | Transcription factor RFX3. | Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. | 0.769 |
RFX3 | BCO2 | A0A2Y9HKS6 | A0A2Y9HRC2 | Transcription factor RFX3. | LOW QUALITY PROTEIN: beta,beta-carotene 9',10'-oxygenase. | 0.505 |
RFX3 | CDKAL1 | A0A2Y9HKS6 | A0A2Y9HLL1 | Transcription factor RFX3. | Threonylcarbamoyladenosine tRNA methylthiotransferase. | 0.517 |
RFX3 | CHEK2 | A0A2Y9HKS6 | A0A2Y9I5M3 | Transcription factor RFX3. | Serine/threonine-protein kinase Chk2. | 0.677 |
RFX3 | FOXJ1 | A0A2Y9HKS6 | A0A2Y9GC08 | Transcription factor RFX3. | Forkhead box protein J1. | 0.734 |
RFX3 | INSM1 | A0A2Y9HKS6 | A0A2Y9HXI7 | Transcription factor RFX3. | Insulinoma-associated protein 1. | 0.495 |
RFX3 | NAALADL2 | A0A2Y9HKS6 | A0A2Y9I2R0 | Transcription factor RFX3. | Inactive N-acetylated-alpha-linked acidic dipeptidase-like protein 2. | 0.497 |
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