Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCLRE1B | NR2C2 | A0A2Y9H2X9 | A0A2Y9HM32 | 5' exonuclease Apollo. | Nuclear receptor subfamily 2 group C member 2. | 0.549 |
DCLRE1B | ZBTB48 | A0A2Y9H2X9 | A0A2Y9GP18 | 5' exonuclease Apollo. | Telomere zinc finger-associated protein. | 0.620 |
DCLRE1B | ZNF524 | A0A2Y9H2X9 | A0A2Y9H141 | 5' exonuclease Apollo. | Zinc finger protein 524. | 0.723 |
DCLRE1B | ZNF827 | A0A2Y9H2X9 | A0A2Y9G7L9 | 5' exonuclease Apollo. | Zinc finger protein 827. | 0.727 |
HLTF | NR2C2 | A0A2Y9GQX7 | A0A2Y9HM32 | Helicase-like transcription factor isoform X1. | Nuclear receptor subfamily 2 group C member 2. | 0.512 |
JAZF1 | NR2C2 | A0A2Y9H841 | A0A2Y9HM32 | Juxtaposed with another zinc finger protein 1. | Nuclear receptor subfamily 2 group C member 2. | 0.890 |
MED1 | NCOR1 | A0A2Y9I7E5 | A0A2Y9HET6 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 1 isoform X1. | 0.554 |
MED1 | NCOR2 | A0A2Y9I7E5 | A0A2Y9HY55 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 2 isoform X1. | 0.595 |
MED1 | NR2C2 | A0A2Y9I7E5 | A0A2Y9HM32 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor subfamily 2 group C member 2. | 0.595 |
NCOR1 | MED1 | A0A2Y9HET6 | A0A2Y9I7E5 | Nuclear receptor corepressor 1 isoform X1. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.554 |
NCOR1 | NCOR2 | A0A2Y9HET6 | A0A2Y9HY55 | Nuclear receptor corepressor 1 isoform X1. | Nuclear receptor corepressor 2 isoform X1. | 0.949 |
NCOR1 | NR2C2 | A0A2Y9HET6 | A0A2Y9HM32 | Nuclear receptor corepressor 1 isoform X1. | Nuclear receptor subfamily 2 group C member 2. | 0.647 |
NCOR2 | MED1 | A0A2Y9HY55 | A0A2Y9I7E5 | Nuclear receptor corepressor 2 isoform X1. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.595 |
NCOR2 | NCOR1 | A0A2Y9HY55 | A0A2Y9HET6 | Nuclear receptor corepressor 2 isoform X1. | Nuclear receptor corepressor 1 isoform X1. | 0.949 |
NCOR2 | NR2C2 | A0A2Y9HY55 | A0A2Y9HM32 | Nuclear receptor corepressor 2 isoform X1. | Nuclear receptor subfamily 2 group C member 2. | 0.646 |
NFKBIL1 | NR2C2 | A0A2Y9HSY4 | A0A2Y9HM32 | NF-kappa-B inhibitor-like protein 1 isoform X1. | Nuclear receptor subfamily 2 group C member 2. | 0.553 |
NR2C2 | DCLRE1B | A0A2Y9HM32 | A0A2Y9H2X9 | Nuclear receptor subfamily 2 group C member 2. | 5' exonuclease Apollo. | 0.549 |
NR2C2 | HLTF | A0A2Y9HM32 | A0A2Y9GQX7 | Nuclear receptor subfamily 2 group C member 2. | Helicase-like transcription factor isoform X1. | 0.512 |
NR2C2 | JAZF1 | A0A2Y9HM32 | A0A2Y9H841 | Nuclear receptor subfamily 2 group C member 2. | Juxtaposed with another zinc finger protein 1. | 0.890 |
NR2C2 | MED1 | A0A2Y9HM32 | A0A2Y9I7E5 | Nuclear receptor subfamily 2 group C member 2. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.595 |
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