STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM234AProtein FAM234A isoform X1. (553 aa)    
Predicted Functional Partners:
RNF122
RING finger protein 122.
      
 0.726
SLC4A5
Anion exchange protein.
      
 0.726
APEH
Acylamino-acid-releasing enzyme isoform X1.
      
 0.721
SF3B2
Splicing factor 3B subunit 2 isoform X1.
      
 0.640
L3HYPDH
trans-3-hydroxy-L-proline dehydratase.
      
 0.612
FGD4
FYVE, RhoGEF and PH domain-containing protein 4.
      
 0.602
LOC110580900
FYVE, RhoGEF and PH domain-containing protein 4.
      
 0.602
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
      
 0.596
ARHGAP1
Rho GTPase-activating protein 1 isoform X1.
      
 0.537
KCTD18
BTB/POZ domain-containing protein KCTD18.
      
 0.537
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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