Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DKC1 | LOC110587901 | A0A2Y9GH93 | A0A2Y9HQC9 | H/ACA ribonucleoprotein complex subunit 4. | rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. | 0.978 |
DKC1 | NAT10 | A0A2Y9GH93 | A0A2Y9GP93 | H/ACA ribonucleoprotein complex subunit 4. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.935 |
DKC1 | NHP2 | A0A2Y9GH93 | A0A2Y9I5V4 | H/ACA ribonucleoprotein complex subunit 4. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.999 |
DKC1 | NOP56 | A0A2Y9GH93 | A0A2Y9H4B2 | H/ACA ribonucleoprotein complex subunit 4. | Nucleolar protein 56. | 0.998 |
DKC1 | NOP58 | A0A2Y9GH93 | A0A2Y9I518 | H/ACA ribonucleoprotein complex subunit 4. | Nucleolar protein 58 isoform X1. | 0.995 |
DKC1 | RRP9 | A0A2Y9GH93 | A0A2Y9HMF9 | H/ACA ribonucleoprotein complex subunit 4. | U3 small nucleolar RNA-interacting protein 2. | 0.531 |
DKC1 | SNU13 | A0A2Y9GH93 | A0A2Y9H042 | H/ACA ribonucleoprotein complex subunit 4. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.946 |
DKC1 | UTP15 | A0A2Y9GH93 | A0A2Y9HWD0 | H/ACA ribonucleoprotein complex subunit 4. | U3 small nucleolar RNA-associated protein 15 homolog. | 0.601 |
DKC1 | UTP4 | A0A2Y9GH93 | A0A2Y9IBM9 | H/ACA ribonucleoprotein complex subunit 4. | U3 small nucleolar RNA-associated protein 4 homolog isoform X1. | 0.635 |
LOC110587901 | DKC1 | A0A2Y9HQC9 | A0A2Y9GH93 | rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. | H/ACA ribonucleoprotein complex subunit 4. | 0.978 |
LOC110587901 | NAT10 | A0A2Y9HQC9 | A0A2Y9GP93 | rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.965 |
LOC110587901 | NHP2 | A0A2Y9HQC9 | A0A2Y9I5V4 | rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.965 |
LOC110587901 | NOP56 | A0A2Y9HQC9 | A0A2Y9H4B2 | rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. | Nucleolar protein 56. | 0.998 |
LOC110587901 | NOP58 | A0A2Y9HQC9 | A0A2Y9I518 | rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. | Nucleolar protein 58 isoform X1. | 0.997 |
LOC110587901 | RPS5 | A0A2Y9HQC9 | A0A2Y9HE17 | rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. | 40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. | 0.964 |
LOC110587901 | RRP9 | A0A2Y9HQC9 | A0A2Y9HMF9 | rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. | U3 small nucleolar RNA-interacting protein 2. | 0.993 |
LOC110587901 | SNU13 | A0A2Y9HQC9 | A0A2Y9H042 | rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.994 |
LOC110587901 | UTP15 | A0A2Y9HQC9 | A0A2Y9HWD0 | rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. | U3 small nucleolar RNA-associated protein 15 homolog. | 0.966 |
LOC110587901 | UTP4 | A0A2Y9HQC9 | A0A2Y9IBM9 | rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. | U3 small nucleolar RNA-associated protein 4 homolog isoform X1. | 0.974 |
NAT10 | DKC1 | A0A2Y9GP93 | A0A2Y9GH93 | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | H/ACA ribonucleoprotein complex subunit 4. | 0.935 |
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