STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGFOD22-oxoglutarate and iron-dependent oxygenase domain-containing protein 2. (350 aa)    
Predicted Functional Partners:
WDR83
WD repeat domain-containing protein 83.
   
  
 0.737
TMEM218
Transmembrane protein 218.
      
 0.642
TRMT2A
tRNA (Uracil-5-)-methyltransferase homolog A; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
   
    0.628
WBP1
WW domain-binding protein 1 isoform X1.
      
 0.628
RASSF3
Ras association domain-containing protein 3.
      
 0.619
PRSS12
Neurotrypsin; Belongs to the peptidase S1 family.
      
 0.483
JMJD4
jmjC domain-containing protein 4.
   
  
 0.407
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.