STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIOK1Serine/threonine-protein kinase RIO1. (464 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.996
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.993
LTV1
Protein LTV1 homolog.
   
 0.990
RPS2
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.984
RPS14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
 0.974
RPS7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.966
WDR77
LOW QUALITY PROTEIN: methylosome protein 50.
   
 
 0.955
RPS3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.945
LOC110570431
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
 0.934
RPS9
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
  0.924
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.