Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATL1 | REEP1 | A0A2Y9HZV1 | A0A2Y9HNZ2 | Atlastin-1. | Receptor expression-enhancing protein. | 0.805 |
ATL1 | RTN1 | A0A2Y9HZV1 | A0A2Y9I638 | Atlastin-1. | Reticulon. | 0.601 |
ATL1 | SPAST | A0A2Y9HZV1 | A0A2Y9HT39 | Atlastin-1. | Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Severing activity is not dependent on tubulin acetylation or detyrosination. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation [...] | 0.803 |
ATL1 | ZFYVE27 | A0A2Y9HZV1 | A0A2Y9I1I8 | Atlastin-1. | Protrudin isoform X1. | 0.550 |
ATL3 | REEP1 | A0A2Y9GTI6 | A0A2Y9HNZ2 | Atlastin-3 isoform X1. | Receptor expression-enhancing protein. | 0.634 |
ATL3 | RTN1 | A0A2Y9GTI6 | A0A2Y9I638 | Atlastin-3 isoform X1. | Reticulon. | 0.590 |
ATL3 | SPAST | A0A2Y9GTI6 | A0A2Y9HT39 | Atlastin-3 isoform X1. | Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Severing activity is not dependent on tubulin acetylation or detyrosination. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation [...] | 0.720 |
ATL3 | ZFYVE27 | A0A2Y9GTI6 | A0A2Y9I1I8 | Atlastin-3 isoform X1. | Protrudin isoform X1. | 0.506 |
CEP55 | CHMP6 | A0A2Y9I2B3 | A0A2Y9GBQ2 | Centrosomal protein of 55 kDa. | Charged multivesicular body protein 6 isoform X1. | 0.522 |
CEP55 | IST1 | A0A2Y9I2B3 | A0A2Y9ICF7 | Centrosomal protein of 55 kDa. | IST1 homolog isoform X1. | 0.477 |
CEP55 | SPAST | A0A2Y9I2B3 | A0A2Y9HT39 | Centrosomal protein of 55 kDa. | Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Severing activity is not dependent on tubulin acetylation or detyrosination. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation [...] | 0.764 |
CHMP6 | CEP55 | A0A2Y9GBQ2 | A0A2Y9I2B3 | Charged multivesicular body protein 6 isoform X1. | Centrosomal protein of 55 kDa. | 0.522 |
CHMP6 | IST1 | A0A2Y9GBQ2 | A0A2Y9ICF7 | Charged multivesicular body protein 6 isoform X1. | IST1 homolog isoform X1. | 0.892 |
CHMP6 | SPAST | A0A2Y9GBQ2 | A0A2Y9HT39 | Charged multivesicular body protein 6 isoform X1. | Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Severing activity is not dependent on tubulin acetylation or detyrosination. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation [...] | 0.743 |
IST1 | CEP55 | A0A2Y9ICF7 | A0A2Y9I2B3 | IST1 homolog isoform X1. | Centrosomal protein of 55 kDa. | 0.477 |
IST1 | CHMP6 | A0A2Y9ICF7 | A0A2Y9GBQ2 | IST1 homolog isoform X1. | Charged multivesicular body protein 6 isoform X1. | 0.892 |
IST1 | SPAST | A0A2Y9ICF7 | A0A2Y9HT39 | IST1 homolog isoform X1. | Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Severing activity is not dependent on tubulin acetylation or detyrosination. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation [...] | 0.976 |
KATNB1 | SPAST | A0A2Y9I845 | A0A2Y9HT39 | Katanin p80 WD40 repeat-containing subunit B1; Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Micr [...] | Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Severing activity is not dependent on tubulin acetylation or detyrosination. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation [...] | 0.788 |
REEP1 | ATL1 | A0A2Y9HNZ2 | A0A2Y9HZV1 | Receptor expression-enhancing protein. | Atlastin-1. | 0.805 |
REEP1 | ATL3 | A0A2Y9HNZ2 | A0A2Y9GTI6 | Receptor expression-enhancing protein. | Atlastin-3 isoform X1. | 0.634 |
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