STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATOX1Copper transport protein ATOX1. (68 aa)    
Predicted Functional Partners:
ATP7A
Copper-transporting ATPase 1.
    
 0.994
ATP7B
Copper-transporting ATPase 2.
    
 0.980
MRPS11
28S ribosomal protein S11, mitochondrial; Belongs to the universal ribosomal protein uS11 family.
   
   0.803
LOC110582475
Cytochrome c oxidase copper chaperone.
   
 
 0.781
CCS
Copper chaperone for superoxide dismutase isoform X1.
    
 
 0.754
RRN3
RNA polymerase I-specific transcription initiation factor RRN3.
    
 
 0.717
LOC110583500
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1.
   
 
 0.685
NDUFA5
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5.
   
 
 0.685
LOC110591111
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like.
   
 
 0.685
SOD1
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 0.684
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.