STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPERTSpermatid-associated protein isoform X1. (440 aa)    
Predicted Functional Partners:
UNC79
Protein unc-79 homolog.
    
 0.724
CBY3
LOW QUALITY PROTEIN: protein chibby homolog 3.
      
 0.724
SPATA9
Spermatogenesis-associated protein 9.
      
 0.719
EVX2
Homeobox even-skipped homolog protein 2.
      
 0.719
GTF2F2
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
    
 0.684
ODF4
LOW QUALITY PROTEIN: outer dense fiber protein 4.
      
 0.681
ODF2L
Outer dense fiber protein 2-like isoform X1.
      
 0.677
CABYR
Calcium-binding tyrosine phosphorylation-regulated protein isoform X2.
   
 0.661
PKDREJ
Polycystic kidney disease and receptor for egg jelly-related protein.
    
 
 0.659
HOXD12
Homeobox protein Hox-D12.
      
 0.633
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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