STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTN4Reticulon. (1196 aa)    
Predicted Functional Partners:
RTN3
Reticulon.
    
0.972
BACE1
Beta-secretase 1; Belongs to the peptidase A1 family.
   
 0.955
BACE2
Beta-secretase 2; Belongs to the peptidase A1 family.
   
 0.930
LINGO1
Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1.
   
 0.749
OMG
Oligodendrocyte-myelin glycoprotein.
    
 0.749
MAG
Myelin-associated glycoprotein isoform X2.
     
 0.742
NGFR
Tumor necrosis factor receptor superfamily member 16.
     
 0.742
ATL3
Atlastin-3 isoform X1.
    
 
 0.686
ATL1
Atlastin-1.
    
 
 0.664
ATL2
Atlastin-2 isoform X3.
    
 
 0.656
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.