STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKD2L2Polycystic kidney disease 2-like 2 protein. (611 aa)    
Predicted Functional Partners:
FAM13B
Protein FAM13B.
      
 0.730
SPATA24
Spermatogenesis-associated protein 24.
      
 0.730
PKD1L3
LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 3.
    
0.635
PKD1L2
LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2.
    
0.635
PKDREJ
Polycystic kidney disease and receptor for egg jelly-related protein.
    
0.623
PKD1
Polycystin-1.
    
0.619
BRD8
Bromodomain-containing protein 8 isoform X1.
    
 
 0.617
ATP10A
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.615
EXOC5
Exocyst complex component 5 isoform X1.
     
 0.571
CDC23
Cell division cycle protein 23 homolog.
      
 0.536
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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