STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNTNAP4Contactin-associated protein-like 4 isoform X1. (1220 aa)    
Predicted Functional Partners:
CNTN2
Contactin-2.
   
 0.827
CNTN1
Contactin-1.
   
 0.806
NFASC
Neurofascin isoform X1.
   
 0.788
DDX39B
Spliceosome RNA helicase DDX39B isoform X1.
   
    0.583
DDX39A
ATP-dependent RNA helicase DDX39A.
   
    0.583
CCDC117
Coiled-coil domain-containing protein 117.
      
 0.472
VEPH1
Ventricular zone-expressed PH domain-containing protein homolog 1 isoform X1.
      
 0.459
CNTN4
Contactin-4.
   
 0.430
CNTN3
Contactin-3.
   
 0.427
CNTN5
Contactin-5.
   
 0.424
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.