STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHKBP1SH3KBP1-binding protein 1 isoform X1. (704 aa)    
Predicted Functional Partners:
PACRGL
PACRG-like protein isoform X1.
      
 0.728
BTBD10
BTB/POZ domain-containing protein 10.
      
 0.716
KCTD19
BTB/POZ domain-containing protein KCTD19.
    
 
 0.681
RANGAP1
Ran GTPase-activating protein 1.
   
  
 0.557
LRRC23
Leucine-rich repeat-containing protein 23.
    
 
 0.521
KCTD1
BTB/POZ domain-containing protein KCTD1 isoform X1.
    
 
0.519
TTBK2
Tau-tubulin kinase 2.
      
 0.517
GUCD1
Protein GUCD1 isoform X1.
      
 0.491
MACC1
Metastasis-associated in colon cancer protein 1.
      
 0.491
TBC1D12
TBC1 domain family member 12.
      
 0.487
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.