Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALS2 | LOC110572053 | A0A2Y9IAF4 | A0A2Y9GAD6 | Alsin. | E3 SUMO-protein ligase RanBP2-like. | 0.801 |
ALS2 | TMCO6 | A0A2Y9IAF4 | A0A2Y9I664 | Alsin. | Transmembrane and coiled-coil domain-containing protein 6 isoform X1. | 0.495 |
CSE1L | KPNB1 | A0A2Y9GQV3 | A0A2Y9IFM3 | Exportin-2. | Importin subunit beta-1. | 0.593 |
CSE1L | LOC110572053 | A0A2Y9GQV3 | A0A2Y9GAD6 | Exportin-2. | E3 SUMO-protein ligase RanBP2-like. | 0.498 |
CSE1L | NUP153 | A0A2Y9GQV3 | A0A2Y9HLP0 | Exportin-2. | Nuclear pore complex protein Nup153. | 0.450 |
CSE1L | TMCO6 | A0A2Y9GQV3 | A0A2Y9I664 | Exportin-2. | Transmembrane and coiled-coil domain-containing protein 6 isoform X1. | 0.702 |
EXOSC10 | KPNB1 | A0A2Y9GP55 | A0A2Y9IFM3 | Exosome component 10. | Importin subunit beta-1. | 0.923 |
EXOSC10 | NCBP1 | A0A2Y9GP55 | A0A2Y9HDP8 | Exosome component 10. | Nuclear cap-binding protein subunit 1 isoform X3. | 0.483 |
EXOSC10 | RRP8 | A0A2Y9GP55 | A0A2Y9GQ89 | Exosome component 10. | Ribosomal RNA-processing protein 8; Essential component of the eNoSC (energy-dependent nucleolar silencing) complex, a complex that mediates silencing of rDNA in response to intracellular energy status and acts by recruiting histone- modifying enzymes. The eNoSC complex is able to sense the energy status of cell: upon glucose starvation, elevation of NAD(+)/NADP(+) ratio activates SIRT1, leading to histone H3 deacetylation followed by dimethylation of H3 at 'Lys-9' (H3K9me2) by SUV39H1 and the formation of silent chromatin in the rDNA locus. In the complex, RRP8 binds to H3K9me2 and pr [...] | 0.631 |
EXOSC10 | TMCO6 | A0A2Y9GP55 | A0A2Y9I664 | Exosome component 10. | Transmembrane and coiled-coil domain-containing protein 6 isoform X1. | 0.529 |
KPNB1 | CSE1L | A0A2Y9IFM3 | A0A2Y9GQV3 | Importin subunit beta-1. | Exportin-2. | 0.593 |
KPNB1 | EXOSC10 | A0A2Y9IFM3 | A0A2Y9GP55 | Importin subunit beta-1. | Exosome component 10. | 0.923 |
KPNB1 | LOC110572053 | A0A2Y9IFM3 | A0A2Y9GAD6 | Importin subunit beta-1. | E3 SUMO-protein ligase RanBP2-like. | 0.927 |
KPNB1 | NCBP1 | A0A2Y9IFM3 | A0A2Y9HDP8 | Importin subunit beta-1. | Nuclear cap-binding protein subunit 1 isoform X3. | 0.805 |
KPNB1 | NCBP2 | A0A2Y9IFM3 | A0A2Y9HGB8 | Importin subunit beta-1. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | 0.873 |
KPNB1 | NUP153 | A0A2Y9IFM3 | A0A2Y9HLP0 | Importin subunit beta-1. | Nuclear pore complex protein Nup153. | 0.945 |
KPNB1 | RRP8 | A0A2Y9IFM3 | A0A2Y9GQ89 | Importin subunit beta-1. | Ribosomal RNA-processing protein 8; Essential component of the eNoSC (energy-dependent nucleolar silencing) complex, a complex that mediates silencing of rDNA in response to intracellular energy status and acts by recruiting histone- modifying enzymes. The eNoSC complex is able to sense the energy status of cell: upon glucose starvation, elevation of NAD(+)/NADP(+) ratio activates SIRT1, leading to histone H3 deacetylation followed by dimethylation of H3 at 'Lys-9' (H3K9me2) by SUV39H1 and the formation of silent chromatin in the rDNA locus. In the complex, RRP8 binds to H3K9me2 and pr [...] | 0.923 |
KPNB1 | TMCO6 | A0A2Y9IFM3 | A0A2Y9I664 | Importin subunit beta-1. | Transmembrane and coiled-coil domain-containing protein 6 isoform X1. | 0.771 |
LOC110572053 | ALS2 | A0A2Y9GAD6 | A0A2Y9IAF4 | E3 SUMO-protein ligase RanBP2-like. | Alsin. | 0.801 |
LOC110572053 | CSE1L | A0A2Y9GAD6 | A0A2Y9GQV3 | E3 SUMO-protein ligase RanBP2-like. | Exportin-2. | 0.498 |
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