STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GALNT13Polypeptide N-acetylgalactosaminyltransferase. (558 aa)    
Predicted Functional Partners:
C1GALT1
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.844
ST6GALNAC1
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.
     
 0.836
C1GALT1C1
C1GALT1-specific chaperone 1.
     
 0.828
C1GALT1C1L
LOW QUALITY PROTEIN: C1GALT1-specific chaperone 1-like protein.
     
 0.828
GCNT1
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase.
     
 0.802
GCNT3
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3.
     
 0.802
B3GNT3
Hexosyltransferase.
     
 0.792
B3GNT6
Hexosyltransferase.
     
 0.792
AGBL5
Cytosolic carboxypeptidase-like protein 5.
      
 0.756
ZMYM5
Zinc finger MYM-type protein 5 isoform X1.
     
 0.754
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.