STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SENP1Sentrin-specific protease 1. (645 aa)    
Predicted Functional Partners:
RANGAP1
Ran GTPase-activating protein 1.
    
 
 0.934
LOC110589552
Small ubiquitin-related modifier 1-like.
    
 0.923
SUMO1
Small ubiquitin-related modifier.
    
 0.923
LOC110594239
Small ubiquitin-related modifier.
    
 0.923
SUMO3
Small ubiquitin-related modifier.
    
 0.820
LOC110571316
Small ubiquitin-related modifier.
    
 0.820
SUMO2
Small ubiquitin-related modifier.
    
 0.820
LOC110588206
Small ubiquitin-related modifier.
    
 0.820
PIAS4
E3 SUMO-protein ligase PIAS4 isoform X1.
   
 
 0.792
RANBP6
LOW QUALITY PROTEIN: ran-binding protein 6.
    
 
 0.774
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.