STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR83WD repeat domain-containing protein 83. (315 aa)    
Predicted Functional Partners:
LAMTOR3
Ragulator complex protein LAMTOR3.
   
 0.955
SF3B4
Splicing factor 3B subunit 4.
    
 
 0.942
PRPF8
pre-mRNA-processing-splicing factor 8.
    
   0.923
GPATCH1
LOW QUALITY PROTEIN: G patch domain-containing protein 1.
    
 
 0.893
OGFOD2
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2.
   
  
 0.737
WDR83OS
Protein Asterix.
   
  
 0.736
RBM39
RNA-binding protein 39 isoform X1.
      
 0.722
RBM6
LOW QUALITY PROTEIN: RNA-binding protein 6.
      
 0.626
RASSF3
Ras association domain-containing protein 3.
      
 0.619
ERI2
ERI1 exoribonuclease 2.
   
  
 0.616
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.