STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppCDipeptide transport system permease protein dppc. (300 aa)    
Predicted Functional Partners:
dppD
Dipeptide transport atp-binding protein dppd; Belongs to the ABC transporter superfamily.
 
 0.999
dppF
Putative atp-binding component of dipeptide transport system; Belongs to the ABC transporter superfamily.
 0.999
dppB
Dipeptide transport system permease protein dppb.
 
 0.998
dppA
Periplasmic dipeptide transport protein.
 0.986
sapD
Peptide transport system atp-binding protein sapd; Belongs to the ABC transporter superfamily.
 
   
 0.975
oppD
Oligopeptide transport atp-binding protein oppd; Belongs to the ABC transporter superfamily.
  
 0.972
oppF
Oligopeptide transport atp-binding protein oppf; Belongs to the ABC transporter superfamily.
  
 0.949
oppB
Oligopeptide transport system permease protein oppb.
  
 0.922
sapA
Peptide transport periplasmic protein sapa.
 
 0.892
sapF
Peptide transport system atp-binding protein sapf.
 
     0.870
Your Current Organism:
Photorhabdus asymbiotica
NCBI taxonomy Id: 291112
Other names: ATCC 43950, CIP 106331, DSM 15149, P. asymbiotica, strain 3265-86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.