node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAU_00587 | ppdA | PAU_00587 | PAU_00585 | Conserved hypothetical protein. | Prepilin peptidase dependent protein a. | 0.564 |
PAU_00587 | ppdB | PAU_00587 | PAU_00586 | Conserved hypothetical protein. | Prepilin peptidase dependent protein b. | 0.827 |
PAU_00587 | ppdC | PAU_00587 | PAU_00588 | Conserved hypothetical protein. | Prepilin peptidase dependent protein c. | 0.834 |
PAU_00587 | ptrA | PAU_00587 | PAU_00590 | Conserved hypothetical protein. | Protease iii (pitrilysin); Belongs to the peptidase M16 family. | 0.763 |
PAU_00587 | recB | PAU_00587 | PAU_00591 | Conserved hypothetical protein. | Exodeoxyribonuclease V beta chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repai [...] | 0.763 |
PAU_00587 | recC | PAU_00587 | PAU_00589 | Conserved hypothetical protein. | Exodeoxyribonuclease v gamma chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repa [...] | 0.794 |
PAU_00587 | recD | PAU_00587 | PAU_00592 | Conserved hypothetical protein. | Exodeoxyribonuclease V alpha chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repa [...] | 0.755 |
polA | recB | PAU_00299 | PAU_00591 | Dna polymerase I polA; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Exodeoxyribonuclease V beta chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repai [...] | 0.492 |
polA | recC | PAU_00299 | PAU_00589 | Dna polymerase I polA; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Exodeoxyribonuclease v gamma chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repa [...] | 0.459 |
polA | recD | PAU_00299 | PAU_00592 | Dna polymerase I polA; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Exodeoxyribonuclease V alpha chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repa [...] | 0.475 |
ppdA | PAU_00587 | PAU_00585 | PAU_00587 | Prepilin peptidase dependent protein a. | Conserved hypothetical protein. | 0.564 |
ppdA | ppdB | PAU_00585 | PAU_00586 | Prepilin peptidase dependent protein a. | Prepilin peptidase dependent protein b. | 0.959 |
ppdA | ppdC | PAU_00585 | PAU_00588 | Prepilin peptidase dependent protein a. | Prepilin peptidase dependent protein c. | 0.564 |
ppdA | ptrA | PAU_00585 | PAU_00590 | Prepilin peptidase dependent protein a. | Protease iii (pitrilysin); Belongs to the peptidase M16 family. | 0.555 |
ppdA | recB | PAU_00585 | PAU_00591 | Prepilin peptidase dependent protein a. | Exodeoxyribonuclease V beta chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repai [...] | 0.469 |
ppdA | recC | PAU_00585 | PAU_00589 | Prepilin peptidase dependent protein a. | Exodeoxyribonuclease v gamma chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repa [...] | 0.519 |
ppdA | recD | PAU_00585 | PAU_00592 | Prepilin peptidase dependent protein a. | Exodeoxyribonuclease V alpha chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repa [...] | 0.481 |
ppdB | PAU_00587 | PAU_00586 | PAU_00587 | Prepilin peptidase dependent protein b. | Conserved hypothetical protein. | 0.827 |
ppdB | ppdA | PAU_00586 | PAU_00585 | Prepilin peptidase dependent protein b. | Prepilin peptidase dependent protein a. | 0.959 |
ppdB | ppdC | PAU_00586 | PAU_00588 | Prepilin peptidase dependent protein b. | Prepilin peptidase dependent protein c. | 0.875 |