wbnF protein (Photorhabdus asymbiotica) - STRING interaction network

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Score

wbnF

Nucleotide sugar epimerase. (337 aa)

Predicted Functional Partners:

ugd

0.990

galU

0.946

syrE-2

0.751

sypC2

0.670

rpsS

0.547

rfaG

0.545

walR

0.526

rplN

0.515

rpsC

0.500

rpsQ

0.493

Your Current Organism:

Photorhabdus asymbiotica

NCBI taxonomy Id: 291112
Other names: ATCC 43950, CIP 106331, DSM 15149, P. asymbiotica, strain 3265-86

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
galU	ugd	PAU_02025	PAU_02026	Utp--glucose-1-phosphate uridylyltransferase (udp-glucos pyrophosphorylase) (udpgp).	Putative udp-glucose dehydrogenase (putative nucleotide suga dehydrogenase).	0.993
galU	wbnF	PAU_02025	PAU_02027	Utp--glucose-1-phosphate uridylyltransferase (udp-glucos pyrophosphorylase) (udpgp).	Nucleotide sugar epimerase.	0.946
rfaG	wbnF	PAU_04358	PAU_02027	Lipopolysaccharide core biosynthesis protein rfag (glucosyltransferas i).	Nucleotide sugar epimerase.	0.545
rplN	rpsC	PAU_04206	PAU_04209	50s ribosomal subunit protein l14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplN	rpsQ	PAU_04206	PAU_04207	50s ribosomal subunit protein l14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	Putative 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999
rplN	rpsS	PAU_04206	PAU_04211	50s ribosomal subunit protein l14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rplN	sypC2	PAU_04206	PAU_02221	50s ribosomal subunit protein l14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	Syringopeptin synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.	0.814
rplN	syrE-2	PAU_04206	PAU_02675	50s ribosomal subunit protein l14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	Complete genome; Antibiotic synthesis; syringomycin synthetase.	0.803
rplN	wbnF	PAU_04206	PAU_02027	50s ribosomal subunit protein l14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	Nucleotide sugar epimerase.	0.515
rpsC	rplN	PAU_04209	PAU_04206	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	50s ribosomal subunit protein l14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.999
rpsC	rpsQ	PAU_04209	PAU_04207	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	Putative 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999
rpsC	rpsS	PAU_04209	PAU_04211	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rpsC	wbnF	PAU_04209	PAU_02027	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	Nucleotide sugar epimerase.	0.500
rpsQ	rplN	PAU_04207	PAU_04206	Putative 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	50s ribosomal subunit protein l14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.999
rpsQ	rpsC	PAU_04207	PAU_04209	Putative 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rpsQ	rpsS	PAU_04207	PAU_04211	Putative 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rpsQ	sypC2	PAU_04207	PAU_02221	Putative 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	Syringopeptin synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.	0.713
rpsQ	syrE-2	PAU_04207	PAU_02675	Putative 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	Complete genome; Antibiotic synthesis; syringomycin synthetase.	0.696
rpsQ	wbnF	PAU_04207	PAU_02027	Putative 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	Nucleotide sugar epimerase.	0.493
rpsS	rplN	PAU_04211	PAU_04206	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	50s ribosomal subunit protein l14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.999