STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAU_03426Conserved hypothetical protein. (260 aa)    
Predicted Functional Partners:
PAU_03427
Ubiquinol oxidase polypeptide II (Cytochrome O subunit 2) (Oxidase BO(3) subunit 2) (Cytochrome O ubiquinol oxidase subunit 2) (Ubiquinol oxidase chain B).
       0.438
CyoD
cyoD; Cytochrome O ubiquinol oxidase protein cyoD (Ubiquinol oxidase chain D).
       0.438
PAU_03425
AmpG protein.
       0.434
CyoC
cyoC; Cytochrome O ubiquinol oxidase subunit III (Ubiquinol oxidase chain C).
       0.414
cyoE
cyoE; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
       0.412
PAU_03428
Ubiquinol oxidase polypeptide I (Cytochrome O subunit 1) (Oxidase BO(3) subunit 1) (Cytochrome O ubiquinol oxidase subunit 1) (Ubiquinol oxidase chain A); Belongs to the heme-copper respiratory oxidase family.
       0.405
Your Current Organism:
Photorhabdus asymbiotica
NCBI taxonomy Id: 291112
Other names: ATCC 43950, CIP 106331, DSM 15149, P. asymbiotica, strain 3265-86
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