STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAU_03465Conserved hypothetical protein. (125 aa)    
Predicted Functional Partners:
PAU_03468
Conserved hypothetical protein.
       0.658
PAU_03466
Putative type III secretion apparatus protein.
       0.655
PAU_03467
Hypothetical protein.
       0.648
PAU_03469
Putative Type III secretion ATP synthase hrcN.
       0.494
PAU_03472
Conserved hypothetical protein.
       0.444
PAU_03470
Putative type III secretion system EscC protein.
       0.420
PAU_03471
Hypothetical protein.
       0.420
PAU_03473
Putative Type III secretion flagellar biosynthesis inner membrane protein.
       0.420
Your Current Organism:
Photorhabdus asymbiotica
NCBI taxonomy Id: 291112
Other names: ATCC 43950, CIP 106331, DSM 15149, P. asymbiotica, strain 3265-86
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.