Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
gene0096 | gene0097 | PAU_03580 | PAU_03581 | Phage holin. | Phage lysozyme. | 0.773 |
gene0096 | gene0098 | PAU_03580 | PAU_03582 | Phage holin. | Similar to cryptic prophage endopeptidase b1362. | 0.777 |
gene0096 | gene0099 | PAU_03580 | PAU_03583 | Phage holin. | Putative phage protein. | 0.465 |
gene0097 | gene0096 | PAU_03581 | PAU_03580 | Phage lysozyme. | Phage holin. | 0.773 |
gene0097 | gene0098 | PAU_03581 | PAU_03582 | Phage lysozyme. | Similar to cryptic prophage endopeptidase b1362. | 0.778 |
gene0097 | gene0099 | PAU_03581 | PAU_03583 | Phage lysozyme. | Putative phage protein. | 0.468 |
gene0098 | gene0096 | PAU_03582 | PAU_03580 | Similar to cryptic prophage endopeptidase b1362. | Phage holin. | 0.777 |
gene0098 | gene0097 | PAU_03582 | PAU_03581 | Similar to cryptic prophage endopeptidase b1362. | Phage lysozyme. | 0.778 |
gene0098 | gene0099 | PAU_03582 | PAU_03583 | Similar to cryptic prophage endopeptidase b1362. | Putative phage protein. | 0.465 |
gene0099 | gene0096 | PAU_03583 | PAU_03580 | Putative phage protein. | Phage holin. | 0.465 |
gene0099 | gene0097 | PAU_03583 | PAU_03581 | Putative phage protein. | Phage lysozyme. | 0.468 |
gene0099 | gene0098 | PAU_03583 | PAU_03582 | Putative phage protein. | Similar to cryptic prophage endopeptidase b1362. | 0.465 |