Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ODN67462.1 | ODN67888.1 | A9E74_00806 | A9E74_00394 | Blue-light-activated protein. | Chemotaxis regulator CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | 0.914 |
ODN67462.1 | bvgS_1 | A9E74_00806 | A9E74_01273 | Blue-light-activated protein. | Virulence sensor protein BvgS precursor. | 0.999 |
ODN67462.1 | cheA_2 | A9E74_00806 | A9E74_00395 | Blue-light-activated protein. | Chemotaxis protein CheA. | 0.931 |
ODN67462.1 | cheA_3 | A9E74_00806 | A9E74_00396 | Blue-light-activated protein. | Chemotaxis protein CheA. | 0.931 |
ODN67462.1 | cheA_4 | A9E74_00806 | A9E74_02221 | Blue-light-activated protein. | Chemotaxis protein CheA. | 0.940 |
ODN67462.1 | cheW_2 | A9E74_00806 | A9E74_00402 | Blue-light-activated protein. | Chemotaxis protein CheW. | 0.910 |
ODN67462.1 | cheY_2 | A9E74_00806 | A9E74_00393 | Blue-light-activated protein. | Chemotaxis protein CheY. | 0.989 |
ODN67462.1 | fliM | A9E74_00806 | A9E74_00380 | Blue-light-activated protein. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.861 |
ODN67462.1 | fliN | A9E74_00806 | A9E74_00381 | Blue-light-activated protein. | Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. | 0.828 |
ODN67462.1 | phoR_2 | A9E74_00806 | A9E74_00905 | Blue-light-activated protein. | Alkaline phosphatase synthesis sensor protein PhoR. | 0.996 |
ODN67888.1 | ODN67462.1 | A9E74_00394 | A9E74_00806 | Chemotaxis regulator CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | Blue-light-activated protein. | 0.914 |
ODN67888.1 | bvgS_1 | A9E74_00394 | A9E74_01273 | Chemotaxis regulator CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | Virulence sensor protein BvgS precursor. | 0.834 |
ODN67888.1 | cheA_2 | A9E74_00394 | A9E74_00395 | Chemotaxis regulator CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | Chemotaxis protein CheA. | 0.997 |
ODN67888.1 | cheA_3 | A9E74_00394 | A9E74_00396 | Chemotaxis regulator CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | Chemotaxis protein CheA. | 0.996 |
ODN67888.1 | cheA_4 | A9E74_00394 | A9E74_02221 | Chemotaxis regulator CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | Chemotaxis protein CheA. | 0.979 |
ODN67888.1 | cheW_2 | A9E74_00394 | A9E74_00402 | Chemotaxis regulator CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | Chemotaxis protein CheW. | 0.969 |
ODN67888.1 | cheY_2 | A9E74_00394 | A9E74_00393 | Chemotaxis regulator CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | Chemotaxis protein CheY. | 0.992 |
ODN67888.1 | fliM | A9E74_00394 | A9E74_00380 | Chemotaxis regulator CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.938 |
ODN67888.1 | fliN | A9E74_00394 | A9E74_00381 | Chemotaxis regulator CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. | 0.744 |
bvgS_1 | ODN67462.1 | A9E74_01273 | A9E74_00806 | Virulence sensor protein BvgS precursor. | Blue-light-activated protein. | 0.999 |
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