Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ODN66240.1 | ODN67264.1 | A9E74_02046 | A9E74_00991 | PilZ domain protein. | Hypothetical protein. | 0.479 |
ODN66240.1 | slyX | A9E74_02046 | A9E74_00438 | PilZ domain protein. | Hypothetical protein; Belongs to the SlyX family. | 0.409 |
ODN67264.1 | ODN66240.1 | A9E74_00991 | A9E74_02046 | Hypothetical protein. | PilZ domain protein. | 0.479 |
ODN67264.1 | slyX | A9E74_00991 | A9E74_00438 | Hypothetical protein. | Hypothetical protein; Belongs to the SlyX family. | 0.444 |
ODN67795.1 | slyX | A9E74_00631 | A9E74_00438 | HIT domain protein. | Hypothetical protein; Belongs to the SlyX family. | 0.649 |
metH | slyX | A9E74_00439 | A9E74_00438 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Hypothetical protein; Belongs to the SlyX family. | 0.587 |
metH | tmcA | A9E74_00439 | A9E74_00437 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | tRNA(Met) cytidine acetyltransferase TmcA; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | 0.566 |
slyX | ODN66240.1 | A9E74_00438 | A9E74_02046 | Hypothetical protein; Belongs to the SlyX family. | PilZ domain protein. | 0.409 |
slyX | ODN67264.1 | A9E74_00438 | A9E74_00991 | Hypothetical protein; Belongs to the SlyX family. | Hypothetical protein. | 0.444 |
slyX | ODN67795.1 | A9E74_00438 | A9E74_00631 | Hypothetical protein; Belongs to the SlyX family. | HIT domain protein. | 0.649 |
slyX | metH | A9E74_00438 | A9E74_00439 | Hypothetical protein; Belongs to the SlyX family. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.587 |
slyX | tmcA | A9E74_00438 | A9E74_00437 | Hypothetical protein; Belongs to the SlyX family. | tRNA(Met) cytidine acetyltransferase TmcA; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | 0.752 |
tmcA | metH | A9E74_00437 | A9E74_00439 | tRNA(Met) cytidine acetyltransferase TmcA; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.566 |
tmcA | slyX | A9E74_00437 | A9E74_00438 | tRNA(Met) cytidine acetyltransferase TmcA; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | Hypothetical protein; Belongs to the SlyX family. | 0.752 |