STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glbNGroup 1 truncated hemoglobin GlbN. (142 aa)    
Predicted Functional Partners:
ODN67207.1
Hypothetical protein.
 
     0.954
ODN67204.1
Hypothetical protein.
 
     0.878
cph2_2
Phytochrome-like protein cph2.
       0.773
gmr_2
Cyclic di-GMP phosphodiesterase Gmr.
    
  0.713
gmr_7
Cyclic di-GMP phosphodiesterase Gmr.
 
     0.706
ODN67290.1
Hypothetical protein.
  
     0.475
gdhA
NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.472
gmr_5
Cyclic di-GMP phosphodiesterase Gmr.
    
  0.427
dsbA
Thiol:disulfide interchange protein DsbA precursor.
  
  
 0.412
Your Current Organism:
Methylophaga muralis
NCBI taxonomy Id: 291169
Other names: M. muralis, Methylophaga muralis corrig. Doronina et al. 2011, Methylophaga murata, NCIMB 13993, VKM B-2303, strain Kr3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.