Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ODN65447.1 | yfkJ | A9E74_02758 | A9E74_01437 | Hypothetical protein. | Low molecular weight protein-tyrosine-phosphatase YfkJ. | 0.644 |
| ODN66113.1 | yfkJ | A9E74_02132 | A9E74_01437 | TPR repeat-containing protein precursor. | Low molecular weight protein-tyrosine-phosphatase YfkJ. | 0.644 |
| ODN66888.1 | rpiA_2 | A9E74_01438 | A9E74_01439 | Fructosamine kinase. | Ribose-5-phosphate isomerase A. | 0.550 |
| ODN66888.1 | yfkJ | A9E74_01438 | A9E74_01437 | Fructosamine kinase. | Low molecular weight protein-tyrosine-phosphatase YfkJ. | 0.955 |
| acpP | truA | A9E74_00818 | A9E74_00551 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.803 |
| acpP | trxA | A9E74_00818 | A9E74_00367 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Thioredoxin-1; Belongs to the thioredoxin family. | 0.442 |
| acpP | ybeY | A9E74_00818 | A9E74_00078 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.803 |
| acpP | yfkJ | A9E74_00818 | A9E74_01437 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Low molecular weight protein-tyrosine-phosphatase YfkJ. | 0.653 |
| argA | yfkJ | A9E74_00036 | A9E74_01437 | Amino-acid acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily. | Low molecular weight protein-tyrosine-phosphatase YfkJ. | 0.658 |
| hflC | yfkJ | A9E74_01538 | A9E74_01437 | Modulator of FtsH protease HflC; HflC and HflK could regulate a protease. | Low molecular weight protein-tyrosine-phosphatase YfkJ. | 0.715 |
| rpiA_2 | ODN66888.1 | A9E74_01439 | A9E74_01438 | Ribose-5-phosphate isomerase A. | Fructosamine kinase. | 0.550 |
| rpiA_2 | yfkJ | A9E74_01439 | A9E74_01437 | Ribose-5-phosphate isomerase A. | Low molecular weight protein-tyrosine-phosphatase YfkJ. | 0.653 |
| truA | acpP | A9E74_00551 | A9E74_00818 | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.803 |
| truA | ybeY | A9E74_00551 | A9E74_00078 | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.868 |
| truA | yfkJ | A9E74_00551 | A9E74_01437 | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | Low molecular weight protein-tyrosine-phosphatase YfkJ. | 0.626 |
| trxA | acpP | A9E74_00367 | A9E74_00818 | Thioredoxin-1; Belongs to the thioredoxin family. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.442 |
| trxA | yfkJ | A9E74_00367 | A9E74_01437 | Thioredoxin-1; Belongs to the thioredoxin family. | Low molecular weight protein-tyrosine-phosphatase YfkJ. | 0.644 |
| ybeY | acpP | A9E74_00078 | A9E74_00818 | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.803 |
| ybeY | truA | A9E74_00078 | A9E74_00551 | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.868 |
| ybeY | yfkJ | A9E74_00078 | A9E74_01437 | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Low molecular weight protein-tyrosine-phosphatase YfkJ. | 0.650 |
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