Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ODN65490.1 | slp | A9E74_02723 | A9E74_01620 | Hypothetical protein. | Outer membrane protein slp precursor. | 0.434 |
ODN65793.1 | slp | A9E74_02442 | A9E74_01620 | Hypothetical protein. | Outer membrane protein slp precursor. | 0.487 |
ODN66670.1 | ODN66671.1 | A9E74_01621 | A9E74_01622 | Hypothetical protein. | Hypothetical protein. | 0.782 |
ODN66670.1 | ODN66672.1 | A9E74_01621 | A9E74_01623 | Hypothetical protein. | Hypothetical protein. | 0.675 |
ODN66670.1 | slp | A9E74_01621 | A9E74_01620 | Hypothetical protein. | Outer membrane protein slp precursor. | 0.512 |
ODN66671.1 | ODN66670.1 | A9E74_01622 | A9E74_01621 | Hypothetical protein. | Hypothetical protein. | 0.782 |
ODN66671.1 | ODN66672.1 | A9E74_01622 | A9E74_01623 | Hypothetical protein. | Hypothetical protein. | 0.675 |
ODN66671.1 | slp | A9E74_01622 | A9E74_01620 | Hypothetical protein. | Outer membrane protein slp precursor. | 0.512 |
ODN66672.1 | ODN66670.1 | A9E74_01623 | A9E74_01621 | Hypothetical protein. | Hypothetical protein. | 0.675 |
ODN66672.1 | ODN66671.1 | A9E74_01623 | A9E74_01622 | Hypothetical protein. | Hypothetical protein. | 0.675 |
ODN66672.1 | slp | A9E74_01623 | A9E74_01620 | Hypothetical protein. | Outer membrane protein slp precursor. | 0.454 |
evgS | rbgA | A9E74_01618 | A9E74_01619 | Sensor protein EvgS precursor. | Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.605 |
evgS | slp | A9E74_01618 | A9E74_01620 | Sensor protein EvgS precursor. | Outer membrane protein slp precursor. | 0.464 |
frdA | hdc | A9E74_00782 | A9E74_00062 | Fumarate reductase flavoprotein subunit. | Histidine decarboxylase. | 0.506 |
frdA | slp | A9E74_00782 | A9E74_01620 | Fumarate reductase flavoprotein subunit. | Outer membrane protein slp precursor. | 0.481 |
hdc | frdA | A9E74_00062 | A9E74_00782 | Histidine decarboxylase. | Fumarate reductase flavoprotein subunit. | 0.506 |
hdc | slp | A9E74_00062 | A9E74_01620 | Histidine decarboxylase. | Outer membrane protein slp precursor. | 0.541 |
rbgA | evgS | A9E74_01619 | A9E74_01618 | Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Sensor protein EvgS precursor. | 0.605 |
rbgA | slp | A9E74_01619 | A9E74_01620 | Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Outer membrane protein slp precursor. | 0.581 |
slp | ODN65490.1 | A9E74_01620 | A9E74_02723 | Outer membrane protein slp precursor. | Hypothetical protein. | 0.434 |
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