STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODN66576.1Hypothetical protein. (210 aa)    
Predicted Functional Partners:
oprP_4
Porin P precursor.
       0.661
ODN66577.1
Hypothetical protein.
       0.651
tusA_1
Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family.
       0.651
nreB_1
Oxygen sensor histidine kinase NreB.
 
     0.530
yfgC_2
TPR repeat-containing protein YfgC precursor; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
       0.467
ODN66580.1
Sulfur oxidation protein SoxY.
       0.467
ODN66581.1
Sulfur oxidation protein SoxZ.
       0.467
uvrY_3
Response regulator UvrY.
       0.467
Your Current Organism:
Methylophaga muralis
NCBI taxonomy Id: 291169
Other names: M. muralis, Methylophaga muralis corrig. Doronina et al. 2011, Methylophaga murata, NCIMB 13993, VKM B-2303, strain Kr3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.