STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yadH_2Inner membrane transport permease YadH. (259 aa)    
Predicted Functional Partners:
drrA_2
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
 0.973
drrA_3
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
 0.884
drrA_1
Doxorubicin resistance ATP-binding protein DrrA.
  
 
 0.631
ybhF_3
Putative ABC transporter ATP-binding protein YbhF.
   
 
 0.613
cysA_1
Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
 
 
  0.611
mutH
DNA mismatch repair protein MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family.
       0.563
yadH_1
Inner membrane transport permease YadH.
  
  
 
0.524
ycaO
Ribosomal protein S12 methylthiotransferase accessory factor YcaO.
  
  
 0.510
pleD_10
Response regulator PleD.
       0.466
mlaE
Putative phospholipid ABC transporter permease protein MlaE.
    
  0.462
Your Current Organism:
Methylophaga muralis
NCBI taxonomy Id: 291169
Other names: M. muralis, Methylophaga muralis corrig. Doronina et al. 2011, Methylophaga murata, NCIMB 13993, VKM B-2303, strain Kr3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.