Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ODN65383.1 | ODN65389.1 | A9E74_02818 | A9E74_02815 | Hypothetical protein. | Polysaccharide biosynthesis/export protein. | 0.669 |
ODN65383.1 | ODN66837.1 | A9E74_02818 | A9E74_01387 | Hypothetical protein. | Exosortase_EpsH. | 0.783 |
ODN65383.1 | ODN66838.1 | A9E74_02818 | A9E74_01388 | Hypothetical protein. | Tetratricopeptide repeat protein. | 0.661 |
ODN65383.1 | flgC | A9E74_02818 | A9E74_02267 | Hypothetical protein. | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.737 |
ODN65383.1 | mnmE | A9E74_02818 | A9E74_00166 | Hypothetical protein. | tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.416 |
ODN65383.1 | ywqD | A9E74_02818 | A9E74_02819 | Hypothetical protein. | Tyrosine-protein kinase YwqD. | 0.912 |
ODN65389.1 | ODN65383.1 | A9E74_02815 | A9E74_02818 | Polysaccharide biosynthesis/export protein. | Hypothetical protein. | 0.669 |
ODN65389.1 | ODN66837.1 | A9E74_02815 | A9E74_01387 | Polysaccharide biosynthesis/export protein. | Exosortase_EpsH. | 0.706 |
ODN65389.1 | ODN66838.1 | A9E74_02815 | A9E74_01388 | Polysaccharide biosynthesis/export protein. | Tetratricopeptide repeat protein. | 0.655 |
ODN65389.1 | ywqD | A9E74_02815 | A9E74_02819 | Polysaccharide biosynthesis/export protein. | Tyrosine-protein kinase YwqD. | 0.980 |
ODN66837.1 | ODN65383.1 | A9E74_01387 | A9E74_02818 | Exosortase_EpsH. | Hypothetical protein. | 0.783 |
ODN66837.1 | ODN65389.1 | A9E74_01387 | A9E74_02815 | Exosortase_EpsH. | Polysaccharide biosynthesis/export protein. | 0.706 |
ODN66837.1 | ODN66838.1 | A9E74_01387 | A9E74_01388 | Exosortase_EpsH. | Tetratricopeptide repeat protein. | 0.954 |
ODN66837.1 | ywqD | A9E74_01387 | A9E74_02819 | Exosortase_EpsH. | Tyrosine-protein kinase YwqD. | 0.643 |
ODN66838.1 | ODN65383.1 | A9E74_01388 | A9E74_02818 | Tetratricopeptide repeat protein. | Hypothetical protein. | 0.661 |
ODN66838.1 | ODN65389.1 | A9E74_01388 | A9E74_02815 | Tetratricopeptide repeat protein. | Polysaccharide biosynthesis/export protein. | 0.655 |
ODN66838.1 | ODN66837.1 | A9E74_01388 | A9E74_01387 | Tetratricopeptide repeat protein. | Exosortase_EpsH. | 0.954 |
ODN66838.1 | ywqD | A9E74_01388 | A9E74_02819 | Tetratricopeptide repeat protein. | Tyrosine-protein kinase YwqD. | 0.594 |
flgC | ODN65383.1 | A9E74_02267 | A9E74_02818 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Hypothetical protein. | 0.737 |
mnmE | ODN65383.1 | A9E74_00166 | A9E74_02818 | tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | Hypothetical protein. | 0.416 |
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