STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_30820Diphosphomevalonate decarboxylase. (307 aa)    
Predicted Functional Partners:
A0A437AQY3
Mevalonate kinase.
  
 
 0.989
TUBRATIS_19650
Isopentenyl-diphosphate-delta-isomerase II.
  
 
 0.968
A0A437APP1
3-hydroxy-3-methylglutaryl reductase.
  
 
 0.949
TUBRATIS_21290
Farnesyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
  
 0.947
A0A437AQH7
Farnesyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
  
 0.947
TUBRATIS_13540
Undecaprenyl pyrophosphate synthetase.
   
 0.936
TUBRATIS_29820
Cytochrome B5; Belongs to the cytochrome b5 family.
   
 
 0.884
A0A437AP71
3-hydroxy-3-methylglutaryl-synthase 2.
 
 
 0.864
TUBRATIS_31300
MULE domain-containing protein.
    
 0.726
TUBRATIS_23350
Uncharacterized protein.
    
 0.726
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.