STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_31010Putative RNA-binding protein. (236 aa)    
Predicted Functional Partners:
TUBRATIS_14280
Uncharacterized protein.
   
 0.995
TUBRATIS_23530
U3 small nucleolar RNA-associated 14 protein.
   
 0.994
TUBRATIS_19670
Uncharacterized protein.
   
 0.993
TUBRATIS_11970
Required for 18S rRNA maturation and 40.
  
 0.993
A0A437ANG0
WD40 repeat-containing protein.
   
 0.990
TUBRATIS_25480
40S ribosome biogenesis GTP-binding.
   
 
 0.989
A0A437AP82
Ribosomal S4.
   
  0.989
A0A437APT7
rRNA-processing FCF1.
   
 0.988
A0A437ANZ8
Uncharacterized protein.
   
 
 0.986
A0A437AP28
U3 small nucleolar RNA-associated 6-like protein.
   
 
 0.986
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.