STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_30270Uncharacterized protein. (632 aa)    
Predicted Functional Partners:
TUBRATIS_22980
Ran GTPase activating protein.
   
 0.987
A0A437ANL2
Leucine-rich repeat-containing protein.
    
 0.896
TUBRATIS_15270
Uncharacterized protein.
    
 0.838
TUBRATIS_26930
F-box domain-containing protein.
   
 
 0.837
A0A437APA6
Leucine repeat-rich protein.
    
 0.828
A0A437ANK9
40S ribosomal S15A.
   
 
 0.771
A0A437ANT6
Peptidase S8.
    
 0.751
A0A437AQC0
Subtilisin ase 1; Belongs to the peptidase S8 family.
    
 0.751
A0A437AQL3
40S ribosomal S28.
   
   0.733
TUBRATIS_18980
Ribosomal S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.729
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.