STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_2834060S ribosomal protein L18. (176 aa)    
Predicted Functional Partners:
TUBRATIS_28380
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.797
TUBRATIS_12630
60S ribosomal L27.
   
 
 0.793
A0A437AQF3
60S ribosomal L13-like.
   
   0.783
A0A437AN99
40S ribosomal S13.
   
   0.779
A0A437AQ91
60s ribosomal L6.
   
 
 0.770
A0A437AQA4
40S ribosomal S3.
   
   0.761
TUBRATIS_12210
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.753
A0A437AN10
40S ribosomal S19.
   
   0.753
A0A437AQX0
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
   0.753
TUBRATIS_25310
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.752
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.