STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_28480Uncharacterized protein. (182 aa)    
Predicted Functional Partners:
TUBRATIS_18900
Dihydrofolate reductase.
     
 0.954
TUBRATIS_27610
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.920
TUBRATIS_27600
Thymidylate synthase.
     
 0.891
TUBRATIS_24320
Short chain dehydrogenase.
   
 
 0.846
TUBRATIS_15190
Dehydrogenase.
   
 
 0.846
TUBRATIS_22730
MRP-like ATP binding protein.
    
  0.783
TUBRATIS_22790
Uncharacterized protein.
    
  0.783
TUBRATIS_10620
Nbp35-like nucleotide binding protein.
    
  0.783
TUBRATIS_10360
Adenylate kinase; Belongs to the adenylate kinase family.
    
 0.779
TUBRATIS_25570
Valine tRNA mitochondrial 1-like; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.713
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.