STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_26740Na+ H+ ANTIPORTER. (474 aa)    
Predicted Functional Partners:
TUBRATIS_22550
Rho-associated coiled-coil containing kinase.
   
 0.574
TUBRATIS_21970
Myotonic dystrophy kinase like.
   
 0.574
TUBRATIS_18210
Rho-associated coiled-coil containing kinase.
   
 0.574
TUBRATIS_15420
Uncharacterized protein.
   
 0.574
A0A437AR18
IRE kinase.
   
 0.574
TUBRATIS_20790
Uncharacterized protein.
   
 
 0.438
TUBRATIS_29940
EF-Hand Ca2+-binding protein.
   
 0.422
TUBRATIS_26410
Myosin regulatory light chain.
   
 0.422
TUBRATIS_24090
Calmodulin.
   
 0.422
TUBRATIS_17050
Recoverin-like calcium-binding protein.
   
 0.422
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.