STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_25750RNase P subunit p30. (233 aa)    
Predicted Functional Partners:
TUBRATIS_13210
POP1 domain-containing protein.
   
 0.995
TUBRATIS_25890
Ribosomal S6.
   
 0.974
TUBRATIS_23500
HS6-type ribosomal protein.
   
 0.933
A0A437ANG9
60S ribosomal L7A.
   
 0.914
A0A437APD0
40S ribosomal S12.
   
 0.914
TUBRATIS_15640
Protein kish; Involved in the early part of the secretory pathway.
   
 
  0.857
TUBRATIS_13470
Ribosomal S4.
   
  0.791
A0A437APH6
40S ribosomal.
   
  0.785
TUBRATIS_17940
Nucleic acid-binding protein.
   
 
  0.773
TUBRATIS_13820
40S ribosomal S7.
   
  0.773
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.