STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_24430Transcription initiation factor TFIID subunit. (108 aa)    
Predicted Functional Partners:
TUBRATIS_14910
Transcription initiation factor TFIID subunit.
   
 0.992
TUBRATIS_18540
Transcription initiation factor TFIID.
   
 0.992
TUBRATIS_29750
Transcription initiation factor tfiid subunit taf5.
    
 0.991
TUBRATIS_27800
TATA-box-binding protein.
    
 0.991
TUBRATIS_19330
Transcription initiation factor subunit.
    
 0.991
TUBRATIS_14260
Subunit A of transcription initiation factor.
    
 0.991
TUBRATIS_13100
Transcription initiation factor TFIID subunit.
    
 0.991
A0A437AND6
Transcription initiation factor TFIID subunit.
    
 0.991
A0A437ANN3
Transcription initiation factor TFIID subunit.
   
 0.991
A0A437APS0
Transcription initiation factor TFIID subunit.
    
 0.991
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.