STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_22050Exocyst complex component Sec3. (513 aa)    
Predicted Functional Partners:
TUBRATIS_18350
Exocyst complex subunit SEC6.
    
 0.938
TUBRATIS_17100
Rab11-like GTPase.
    
 0.651
TUBRATIS_30210
t-SNARE complex subunit/syntaxin.
    
 
 0.645
TUBRATIS_28140
Rho GTPase.
    
 0.496
TUBRATIS_10520
GTP-binding rho1.
    
 0.496
A0A437ANZ2
Rho-related GTP-binding protein.
    
 0.496
A0A437AQF1
Rho-related GTP-binding protein.
    
 0.496
TUBRATIS_13690
Small GTP-binding domain protein.
    
 0.441
A0A437ANP2
Sec1-like intracellular trafficking protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.439
TUBRATIS_30230
GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
    
 0.420
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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