STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_22230Transport yif1. (214 aa)    
Predicted Functional Partners:
TUBRATIS_29870
Rab GTPase-interacting Golgi membrane protein.
    
 
 0.793
A0A437ANF1
Protein YIP.
    
 
 0.793
A0A437ANV8
PRA1 family protein.
   
 
 0.712
TUBRATIS_16770
Translation elongation factor 2.
 
      0.580
TUBRATIS_17110
Rab gtpase.
   
 
 0.550
A0A437APH0
Uncharacterized protein.
    
 
 0.511
TUBRATIS_14600
SYNTAXIN like protein.
      
 0.457
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.