STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_20900Uncharacterized protein. (210 aa)    
Predicted Functional Partners:
TUBRATIS_23680
Uncharacterized protein.
    
 
 0.964
TUBRATIS_17090
Uncharacterized protein.
    
 
 0.910
TUBRATIS_27830
Protein RMD5 like protein.
    
 
 0.905
A0A437ANI7
Vacuolar import and degradation.
    
 
 0.900
TUBRATIS_13320
Uncharacterized protein.
    
 
 0.808
TUBRATIS_23820
Muskelin n-terminus domain-containing protein.
    
 
 0.637
A0A437ANV8
PRA1 family protein.
    
 
 0.445
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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