STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_20460Phenylalanine-tRNA alpha subunit. (515 aa)    
Predicted Functional Partners:
TUBRATIS_25870
Phenylalanyl-tRNA synthetase subunit beta.
  
 0.999
TUBRATIS_26030
Seryl-tRNA synthetase.
  
 
 0.947
TUBRATIS_25300
Tyrosine--tRNA ligase.
  
 
 0.918
TUBRATIS_14740
Ribosomal S7.
  
  
 0.828
TUBRATIS_16800
60S ribosomal L10.
  
 0.777
A0A437APC1
60S ribosomal L11; Belongs to the universal ribosomal protein uL5 family.
   
  
 0.776
TUBRATIS_14570
Threonyl-tRNA synthetase.
  
 
 0.764
TUBRATIS_25570
Valine tRNA mitochondrial 1-like; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.755
A0A437ANW1
Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.753
TUBRATIS_15010
Pseudouridylate synthase.
   
 
 0.751
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.